Modify
your sliding window program from workshop 5 to compute the hydrophobicity
of an amino acid sequence. Use the Kyte and Doolittle scale (lecture #3). Obtain the sequence of bacteriorhodopsin
and save in a file. Your script should read the sequence from the input
file, compute the hydrophobicity as a function of amino acid residue number,
and store the results to an output file. Plot the results in EXCEL and
compare your plot to the one given in lecture #3 and your answer for
workshop 3. Due May 1st.